LncRNA XIST acts as a MicroRNA-520 sponge to regulate the Cisplatin resistance in NSCLC cells by mediating BAX through CeRNA network

Liu, Ting-Ting; Li, Rui; Liu, Xiao; Zhou, Xi-Jia; Huo, Chen; Li, Jian-Ping; Qu, Yi-Qing

doi:10.7150/ijms.49730

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Int J Med Sci 2021; 18(2):419-431. doi:10.7150/ijms.49730 This issue Cite

Research Paper

LncRNA XIST acts as a MicroRNA-520 sponge to regulate the Cisplatin resistance in NSCLC cells by mediating BAX through CeRNA network

Ting-Ting Liu¹, Rui Li¹, Xiao Liu¹, Xi-Jia Zhou¹, Chen Huo¹, Jian-Ping Li¹, Yi-Qing Qu^2✉

1. Department of Pulmonary and Critical Care Medicine, Qilu Hospital, Cheeloo College of Medicine, Shandong University, Jinan 250012, China.
2. Department of Pulmonary and Critical Care Medicine, Qilu Hospital of Shandong University, Jinan 250012, China.

Citation:

Liu TT, Li R, Liu X, Zhou XJ, Huo C, Li JP, Qu YQ. LncRNA XIST acts as a MicroRNA-520 sponge to regulate the Cisplatin resistance in NSCLC cells by mediating BAX through CeRNA network. Int J Med Sci 2021; 18(2):419-431. doi:10.7150/ijms.49730. https://www.medsci.org/v18p0419.htm

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Abstract

Background: In recent years, LncRNA acts as a member of competing endogenous RNA (ceRNA), playing an important role in drug resistance of lung cancer. The aim of this study was to identify potential biomarkers about cisplatin resistant lung cancer cells using a comprehensive ceRNA network.

Methods: GSE6410 (GPL-201) analyzed gene expression changes about cisplatin resistance in A549 NSCLC cells. GSE43249 (GPL-14613) included noncoding RNA expression profiling derived from the cisplatin resistant A549 lung cells. GEO2R, an online analysis tool, analyzed the differentially expressed mRNAs and miRNAs (DEmRNAs and DEmiRNAs). To explore the functional enrichment implication of differentially expressed mRNAs, we used the GO (Gene ontology) and KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway analysis. Through miRDB, Targetscan, Starbase and miRWalk, we found targeted miRNAs. The Kaplan-Meier curve method was used to show clinical survival analysis of targeted RNAs (P<0.05). The Starbase database predicted potential lncRNAs mediated targeted miRNAs. Eventually, the novel ceRNA network of lncRNAs, miRNAs, mRNA was constructed by cytoscape3.7.2.

Results: 118 differentially expressed mRNAs were the basis of the mediated ceRNA network. DAVID and Kaplan-Meier picked out BAX, an apoptosis regulator. Venn diagram demonstrated 8 miRNAs commonly regulating BAX. Starbase predicted lncRNA XIST mediated miRNAs. Finally, lncRNA XIST may be a useful biomarker regulating cisplatin resistance in lung cancer cells and further, we explored the BAX may effect tumor-infiltrating immune cells.

Conclusions: LncRNA XIST competitively bound to miRNA 520 in the regulation of cisplatin resistance by BAX, participating apoptosis in the p53 signaling pathway.

Keywords: ceRNA, LncRNAXIST, biomarker, BAX, apoptosis

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APA

Liu, T.T., Li, R., Liu, X., Zhou, X.J., Huo, C., Li, J.P., Qu, Y.Q. (2021). LncRNA XIST acts as a MicroRNA-520 sponge to regulate the Cisplatin resistance in NSCLC cells by mediating BAX through CeRNA network. International Journal of Medical Sciences, 18(2), 419-431. https://doi.org/10.7150/ijms.49730.

ACS

Liu, T.T.; Li, R.; Liu, X.; Zhou, X.J.; Huo, C.; Li, J.P.; Qu, Y.Q. LncRNA XIST acts as a MicroRNA-520 sponge to regulate the Cisplatin resistance in NSCLC cells by mediating BAX through CeRNA network. Int. J. Med. Sci. 2021, 18 (2), 419-431. DOI: 10.7150/ijms.49730.

NLM

CSE

Liu TT, Li R, Liu X, Zhou XJ, Huo C, Li JP, Qu YQ. 2021. LncRNA XIST acts as a MicroRNA-520 sponge to regulate the Cisplatin resistance in NSCLC cells by mediating BAX through CeRNA network. Int J Med Sci. 18(2):419-431.

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